Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015872199.1_cds_XP_016434709.1_30739
CDS Infomation

[gene=LOC107761055] [db_xref=GeneID:107761055] [protein=zinc finger protein VAR3, chloroplastic-like] [protein_id=XP_016434709.1] [location=complement(join(24613..24730,24806..24904,25374..25496,25868..25924,26865..27208,27413..27530,28053..28414))] [gbkey=CDS]
Sequence

ATGTCAGCTTCTAGATTGTTCTTTCTACTCGGTGCCTCTATTGTCCGAAACCATAATAAG
CCTACAAACACCTTTACTCCATTCAGCCCAATTCGCTTCATAAAGCCATTGGCTTCGCCT
GTTGTACGGTTCCGCAGGTACAATTGTACCTCAGCTACACTTGAGACCAATACAATCGAA
CCAGTGGTCAATACTAGAAATCATCCGTGGCCTGAATGGGTAGCTTTCGTGGACCGTTTG
AAAAGCAAAGGATACGTCACTGAAAGTAAGAGTGAAGATGGTGATGCGAGTATTTATACG
GATATGACTCTGTTAAAAGATGCTTGTCTTAACTTCTCTCGCGACCGTTCCGACATTTTT
AAAAAGTTGTCCAACCAAGATATGCAGACAGTTGTGGAAAAGGGCTGCCCAAATCTATTC
AGGAAGGTCGTTAACTCGGGGAAAAGGCTAAGGCTGCATCTAAACCTTGATGAAGGAGAG
GTATGCGGTGCTTGCATTCTCCGTGGATCATGTGATAGGGCTTACTTGATATTGAAGGAT
GATGAGGGTGTTGCACGTACAGTAGATATTGTGCGAGTCTTGCTTATCTATGCCTTAGAT
CCTGCCGTTATCTCAAGCGGAGCAATGTCTCCTGGTAGAGAGCTTATTGAAGTATCTTCA
AGAAAATTGCTCTCAGAGTTGGTTGAATTAAGCGAGACGCCTTTTGATCCTGAGCATCCA
AGACCTGCTCCCAAGGACTCTCCACAAAAAAAACAGTCTCTTCGTTCAAGAAAGGATGGT
CGGGAAGATGTTCAAATGAAAAGAAGAGATTCAATTGGTCTTGAGGGAGATAAAAAACAT
TCTAATGTCGATATGAAGCAAGGAGATTGGATCTGTTCGCAATGCGACTTTATGAACTTC
TCCCGCAATGCACAATGCCTGAGATGCAAAGCAGAAGGACCTAGTCAAGATGCTCGTGTG
TCAAAGGTTCAAGAAATGAAAACTGGAGATTGGACTTGCCCACAATGTGCCTTCATGAAT
TTTGCTAGCAATACCAAATGCTTACGCTGCCCAGAGCTGCGCCCAAAGAGACTGCTGAAT
CCGGGAGAGTGGGAATGCCCCTCATGCGACTTCTTGAACTACAGAAGAAACATGGTCTGC
AAGAAGTGTGATTGTGAACGTCCCAGGGATGCAAAGAAGCAGTCAAAATACGAGCAGCAA
CTTTGGACAAAGCCTTACTAA

Peptide Sequence

PEP ID

XP_016434709.1
PEP Infomation

PREDICTED: zinc finger protein VAR3, chloroplastic-like [Nicotiana tabacum]
Sequence

MSASRLFFLLGASIVRNHNKPTNTFTPFSPIRFIKPLASPVVRFRRYNCTSATLETNTIE
PVVNTRNHPWPEWVAFVDRLKSKGYVTESKSEDGDASIYTDMTLLKDACLNFSRDRSDIF
KKLSNQDMQTVVEKGCPNLFRKVVNSGKRLRLHLNLDEGEVCGACILRGSCDRAYLILKD
DEGVARTVDIVRVLLIYALDPAVISSGAMSPGRELIEVSSRKLLSELVELSETPFDPEHP
RPAPKDSPQKKQSLRSRKDGREDVQMKRRDSIGLEGDKKHSNVDMKQGDWICSQCDFMNF
SRNAQCLRCKAEGPSQDARVSKVQEMKTGDWTCPQCAFMNFASNTKCLRCPELRPKRLLN
PGEWECPSCDFLNYRRNMVCKKCDCERPRDAKKQSKYEQQLWTKPY

Transcript Sequence

Gene sequence data has not been registered.